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Saturday, January 30th, 2016

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    5:56a
    [Herpetology • 2016] Polyphyly of Asian Tree Toads, Genus Pedostibes Günther, 1876 (Anura: Bufonidae), and the Description of A New Genus, Rentapia, from Southeast Asia


    คางคกต้นไม้ |  Rentapia hosii Pedostibes tuberculosus

    Fig 6. Color pattern and reproductive comparisons between Pedostibes tuberculosus from India and ‘P’. hosii from Southeast Asia.
    (A) ‘Pedostibes’. hosii female from Peninsular Malaysia; inset = vocalizing male from Borneo. (B) Amplectic pair of ‘P’, hosii from Peninsular Malaysia. (C) ‘P’. hosii from Peninsular Malaysia showing oviposition of clutch as strings
    . (D) Vocalizing male of P. tuberculosus from India. (E) Amplectic pair of P. tuberculosus engaged in oviposition. (F) Film of eggs of P. tuberculosus floating in a stream pool.

    Abstract

    The Asian Tree Toad genus Pedostibes, as currently understood, exhibits a conspicuously disjunct distribution, posing several immediate questions relating to the biogeography and taxonomy of this poorly known group. The type species, Pedostibes tuberculosus and P. kempi, are known only from India, whereas P. hosii, P. rugosus, and P. everetti are restricted to Southeast Asia. Several studies have shown that these allopatric groups are polyphyletic, with the Indian Pedostibes embedded within a primarily South Asian clade of toads, containing the genera Adenomus, Xanthophryne, and Duttaphrynus. Southeast Asian Pedostibes on the other hand, are nested within a Southeast Asian clade, which is the sister lineage to the Southeast Asian river toad genus Phrynoidis. We demonstrate that Indian and Southeast Asian Pedostibes are not only allopatric and polyphyletic, but also exhibit significant differences in morphology and reproductive mode, indicating that the Southeast Asian species’ are not congeneric with the true Pedostibes of India. As a taxonomic solution, we describe a new genus, Rentapia gen. nov. to accommodate the Southeast Asian species.

    Fig 1. Map showing distribution of species of Pedostibes and Rentapia gen. nov.



    Phylogenetic analysis
    Both ML and Bayesian phylogenies recovered similar topologies, with the ML tree providing better resolution at deeper nodes. Pedostibes tuberculosus was recovered as part of a primarily South Asian monophyletic clade, where it forms a sister lineage relationship to the clade that contains the genera Adenomus, Xanthophryne, and Duttaphrynus (Pedostibes + (Adenomus + (Xanthophryne + Duttaphrynus))). Males from this clade tend to be small in size with the exception of the genus Duttaphrynus. Southeast Asian ‘Pedostibes’ were reciprocally monophyletic with the genus Phrynoidis and represent a clade that exhibits the largest body size among all South and Southeast Asian toads (Fig 4; S2 Table). Uncorrected p-distances calculated from the mitochondrial alignment demonstrate that Southeast Asian ‘Pedostibes’ are 13–14% divergent from P. tuberculosus and 12–13% divergent from the genus Phrynoidis. These levels of divergences are consistent with other generic level divergences among South Asian, and Southeast Asian bufonids (Fig 5; S3 Table).

    Fig 4. Maximum likelihood phylogeny showing the polyphyletic relationship of Pedostibes and the proposed new genus among the South & Southeast Asian Bufonids.


    Systematics
    Distribution, morphological, natural history, phylogenetic relationships and genetic divergences and genetic data do not support the current taxonomy that unites South Asian and Southeast Asian tree toads under the common genus Pedostibes. Because the Indian species P. tuberculosus has priority as the type species, we propose that the Southeast Asian lineages (‘P’. hosii, and ‘P’. rugosus) be recognized as a separate genus. One remaining, unresolved issue concerns the generic status of P. kempi and ‘P.’ everetti. Pedostibes kempi has not been collected since its original description and no modern specimens or genetic samples are available for study. ‘Pedostibes’ everetti is phenotypically similar to ‘P’. rugosus and the only discrete morphological character differentiating ‘P’. everetti from ‘Prugosus is the absence (vs. presence) of a tarsal ridge. Furthermore, ‘P’. everetti is only known from one juvenile specimen. Based on these limited data, the taxonomic status of these species remains uncertain and additional data will be required to resolve their taxonomic placement. Thus, based on distribution, we tentatively assign P. kempi to the genus Pedostibes and ‘P.’ everetti to the new genus named below, with the caveat that these relationships may need to be re-evaluated when additional data become available. Because the earliest species description of the Southeast Asian group is ‘P.’ hosii, and its only generic synonym, Nectophryne is occupied by a distinct African tree toad lineage, we define and diagnose a new genus for the Southeast Asian clade as follows:

    Description of New Genus
    Rentapia gen. nov. 
    urn:lsid:zoobank.org:act:B692321E-96EF-496E-973B-2348FF22764C

    Type species: Nectophryne hosii Boulenger, 1892; Holotype: BMNH 92.6.3.19

    Diagnosis: Large-bodied toads with a movable coccyx, eight pre-sacral vertebrae, a complete quadratojugal, and small, pigmented ova laid as strings. Interorbital cranial crests absent. Parotoid glands large, distinct; oval, circular or triangular in dorsal view. Fingers webbed at base, tips expanded into flat discs. Feet fully webbed on all toes except fourth. Nuptial pads present in males. Adults are primarily arboreal and inhabit riparian vegetation around small- to moderately-sized forest streams.

    Phylogenetic definition: Rentapia is a node-based name that refers to the clade originating from the most recent common ancestor of ‘Pedostibes’ (Rentapia) hosii and ‘P.’ rugosus (Fig 4).




    Content: The allopatric species of Pedostibes of Southeast Asia from the Isthmus of Kra, Thailand and Peninsular Malaysia, Sumatra, and Borneo: Rentapia hosii and R. rugosus. We also tentatively place ‘P.’ everetti in Rentapia because of its close geographic proximity with the two Southeast Asian taxa, as well as the character state similarities it shares with R. rugosus (webbed hands and feet, finger and toe tips dilated into truncate disks, movable coccyx, eight pre-sacral vertebrae, complete quadratojugal).

    Etymology: The Iban are a subgroup of the indigenous peoples of Borneo (collectively known as the Dayaks) and form the main ethnic group in the Malaysian state of Sarawak. The generic epithet is selected to honor the legendary Iban warrior Libau Rentap, a great war chief, freedom fighter, and Malaysian national hero. Renowned for headhunting, the Iban were subjugated in Sarawak by the White Rajahs (English monarchy), who sought to confiscate land and impose taxes. Libau Rentap rose against the first of the White Rajahs, James Brooke, initiating a rebellion that eventually returned power to the people of Sarawak. The rule of the White Rajahs lasted from 1841 to 1946.

    Discussion: 
    Pedostibes is small in size and deposits medium-sized clutches of eggs that are laid as films. The combination of these traits differentiates it from Rentapia gen. nov., which is diagnosed by its larger body size and an oviposition mode characterized by a large clutch of eggs laid as strings. Given that individual egg sizes in both genera are comparatively similar, this agrees with past studies that show a close correlation of clutch size to female body size. There are also differences in sexually dimorphic traits. Both male and female Pedostibes have the same color pattern, whereas Rentapia hosii females are vividly colored with bright markings, as compared to the duller, uniformly colored males (Fig 6A–6C). However, this color dimorphism has so far been observed only in R. hosii and we do not have evidence for either R. rugosus or R. everetti having such color dimorphism.

    The most widespread Rentapia, R. hosii exhibits marked geographically based variation in female color pattern at different localities across its known distribution. Our analyses inferred a strongly supported genetic split between R. hosii populations from Peninsular Malaysia and those from Borneo. Additionally, females from these populations are phenotypically distinct. Females from Peninsular Malaysia are light green (dark gray when handled or stressed) with large, sparse, irregular yellow spots (Fig 6A–6C), whereas females from Borneo are purplish with yellow vermiculation or uniformly brown. Furthermore, a population from Danum Valley, Sabah, exhibits a phenotype that is distinct from populations from Peninsular Malaysia and the rest of Borneo. Females from Danum Valley have more dense dorsal vermiculations and broad, light-colored marbling on the flanks and posterior region of the thigh. The venter shows faint but distinct marbling whereas the venters of the former two populations are immaculate. However, the genetic divergences between Peninsular Malaysian and Bornean populations are low (2.6%) and more data are required to determine whether these populations represent distinct species.

    Since several recent studies have shown Pedostibes sensu lato to be a non-monophyletic genus within the family Bufonidae, suggested uniting Rentapia with its sister genus, the terrestrial river toad Phrynoidis, as a taxonomic solution. Although this suggestion would resolve the issue of monophyly, we find the recognition of the new genus to be a preferable solution based on several lines of reasoning. First, Rentapia and Phrynoidis exhibit striking morphological differences: Rentapia has expanded and flat finger discs (dilated into keratinized, bulbous tips in Phrynoidis); is considerably smaller in size (female Phrynoidis range from 120 mm to more than 200 mm SVL); lacks supernumerary palmar tubercles (present in Phrynoidis); possesses basal interphalangeal finger webbing (webbing absent in Phrynoidis); and the oral disk of Rentapia tadpoles is half the maximum width of the body (extends the entire width of the body in Phrynoidis). Striking ecological differences are equally apparent. Rentapia is an arboreal habitat specialist, whereas Phrynoidis are terrestrial riparian habitat generalists, that oviposits enormous clutches with an average size of 12,792 eggs per clutch; Finally, we note that genetic divergences of >12.0% (Fig 5) is consistent with other inter-generic divergences within Bufonidae, suggesting that our proposition is not discordant with other, accepted taxonomic arrangements. Although merging Rentapia and Phrynoidis would remedy the polyphyly of Pedostibes sensu lato, the preponderance of differences in morphology, reproductive characteristics, ecology, and molecular characters is best acknowledged by considering these two lineages as separate genera.


    Kin Onn Chan, L. Lee Grismer, Anil Zachariah, Rafe M. Brown and Robin Kurian Abraham. 2016. Polyphyly of Asian Tree Toads, Genus Pedostibes Günther, 1876 (Anura: Bufonidae), and the Description of A New Genus from Southeast Asia.
    PLOS ONE 11(1). DOI:  10.1371/journal.pone.0145903





    3:52p
    [PaleoOrnithology • 2016] Chongmingia zhengi • A New Basal Bird from China with implications for Morphological Diversity in Early Birds



    Chongmingia zhengi 
    Wang, Wang, Wang & Zhou, 2016 

    Abstract
    The Chinese Lower Cretaceous Jehol Group is the second oldest fossil bird-bearing deposit, only surpassed by Archaeopteryx from the German Upper Jurassic Solnhofen Limestones. Here we report a new bird, Chongmingia zhengi gen. et sp. nov., from the Jehol Biota. Phylogenetic analyses indicate that Chongmingia zhengi is basal to the dominant Mesozoic avian clades Enantiornithes and Ornithuromorpha, and represents a new basal avialan lineage. This new discovery adds to our knowledge regarding the phylogenetic differentiation and morphological diversity in early avian evolution. The furcula of Chongmingia is rigid (reducing its efficiency), consequently requiring more power for flight. However, the elongated forelimb and the large deltopectoral crest on the humerus might indicate that the power was available. The unique combination of features present in this species demonstrates that numerous evolutionary experimentations took place in the early evolution of powered flight. The occurrence of gastroliths further confirms that herbivory was common among basal birds. The Jehol birds faced competition with pterosaurs, and occupied sympatric habitats with non-avian theropods, some of which consumed birds. Thus, avialan herbivory may have reduced ecological competition from carnivorous close relatives and other volant vertebrates early in their evolutionary history.

    Systematic paleontology

    Aves Linnaeus, 1758 

    Chongmingia zhengi gen. et sp. nov.

    Etymology: The generic name is from the Mandarin word Chongming, referring to a Chinese mythological bird. The specific epithet is in honour of Mr. Xiaoting Zheng for his generous contribution in the establishment of the Shandong Tianyu Museum of Nature.

    Holotype: STM (Shandong Tianyu Museum of Nature) 9-9, a partial skeleton with associated soft tissues and gastroliths, missing the skull and most of the caudal vertebrae (Fig. 1).

    Locality and horizon: Dapingfang, Liaoning Province, China; Jiufotang Formation, Early Cretaceous (Aptian).

    Figure 1: Photograph and line drawing of the holotype of Chongmingia zhengi gen. et sp. nov. (STM9-9).

    Figure 7: Simplified Mesozoic avian cladogram showing the possible phylogenetic positions of Chongmingia zhengi.
    Analysis using the coelurosaurian matrix places Chongmingia within basal avialans and as the sister group to Ornithothoraces (p1), and analysis using the Mesozoic avian matrix resolves Chongmingia as the most basal avialan, except for Archaeopteryx (p2).
    See Supplementary Figs 2–4 for complete results. (The skeletal drawing and silhouettes were drawn by Min Wang).  doi:  10.1038/srep19700 


    Min Wang, Xiaoli Wang, Yan Wang and Zhonghe Zhou. 2016. A New Basal Bird from China with implications for Morphological Diversity in Early Birds.
    Scientific Reports. 6: 19700. DOI:  10.1038/srep19700

    辽宁大平房早白垩世九佛堂组发现热河生物群一类新的基干鸟类化石:郑氏重明鸟

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