Речь идёт об этом:

> As such, it fails to build respect for intellectual property rights

и об этом:

> Rather than start down this path away from innovation and to further
> promote respect for copyright, the government should abandon the
> Circular's approach and follow a realistic policy framework that
> includes adequate education and effective enforcement of IP rights
> and non-discrimination in business choice, software development, and
> licensing models. The government of Indonesia promised to legalize
> the public sector's use of software, e.g., in the January 13, 2006
> Indonesian Ministry of Communication and Information (MOCI) and
> Microsoft Memorandum of Understanding (MOU) in which the government
> undertakes to legalize government use of its products on government
> computers. We strongly urge USTR to consider the implications that
> Indonesia's open source preference policy has on IP protection and
> access to Indonesia's market for U.S. goods and services.

Так что требования запретить свободные программы там и правда нет, а вот идея, что продвижение свободного ПО способствует неуважению к «интеллектуальной собственности» (т.е. приравнивание свободных программ к пиратству) — вполне себе есть.