The genus Phobetor, named after the Greek god of nightmares, was in 1982 originally described by Natasha Bakhurina as a species of Dsungaripterus (D. parvus), based on a single lower leg bone, PIN 3953. The discovery of more remains later, among which an almost complete skull, GIN 100/31, was reason for Bakhurina to name D. parvus in 1986 as a separate genus, and the species name became Phobetor parvus. However, the genus name Phobetor was already being used as a junior synonym of a species of sculpin, namely, the arctic staghorn sculpin, Gymnocanthus tricuspis (synonym "Phobetor tricuspis" Krøyer, 1844) and thus unavailable. In 2009, Lü and colleagues re-examined much of the known dsungaripterid fossil material, and found that "Phobetor" was indistinguishable from Noripterus, causing them to refer to it as a junior synonym.

 Assigning the "Phobetor" material to Noripterus increases the known size of the latter as it indicates a maximum wingspan of 4 metres (13.1 ft).

 Noripterus lived in the same time and place as the larger Dsungaripterus, in formations that indicate the presence of extensive inland lake systems. Because Noripterus had a more lightly built skull with weaker, more slender teeth than its larger contemporary, it is likely that the two pterosaurs occupied separate ecological niches, with Dsungaripterus hunting in the shallow parts of lakes and eating hard-shelled animals, while Noripterus fed on fish from deeper regions of the lakes.